TAPS
v0.1
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  • Tutorial
    • Muller Brown potential
    • Müller Brown I
    • Müller Brown II
    • GPAO I
    • Gaussian process action optimization
    • Alanine dipeptide
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Tutorial¶

Modules:

Contents:

  • Muller Brown potential
  • Müller Brown I
    • Construction of a pathway
    • Potential calculation
    • Visualization
    • Direct Action Optimization
  • Müller Brown II
    • Previously on Müller Brown I
    • Müller Brown II
    • Pathway optimization on the sine components.
    • Results in the previous example, Müller Brown I
    • Database construction
    • Gaussian Potential
    • Pathway optimization perfomed
  • GPAO I
    • Pathway optimization on the projected space.
    • Iteration reduced from 1100 to
    • Database construction
    • Gaussian Potential
    • Pathway optimization perfomed
  • Gaussian process action optimization
    • Muller Brown GPAO
    • Iteration reduced from 1100 to
    • Database construction
    • Gaussian Potential
    • Pathway optimization perfomed
  • Alanine dipeptide
    • Inverse Projector
    • Trajectory writing
    • VASP calculator
    • Atomic model
    • Paths construction
    • Effective mass
    • VASP Alanine dipeptide with velocity applied
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